Browsing by Author "Roosens, N.H.C."

A multiplex oligonucleotide ligation-PCR method for the genoserotyping of common Salmonella using a liquid bead suspension assay

A practical method to implement strain-level metagenomics-based foodborne outbreak investigation and source tracking in routine

Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5], 12:i:-

Detailed evaluation of data analysis tools for subtyping of bacterial isolates based on whole genome sequencing: Neisseria meningitidis as a Proof of Concept

Development of an NGS-based workflow for improved monitoring of circulating plasmids in support of risk assessment of antimicrobial resistance gene dissemination

First detection of a plasmid located carbapenem resistant blaVIM-1 gene in E.coli isolated from meat products at retail in Belgium in 2015

The benefits of whole genome sequencing for foodborne outbreak investigation from the perspective of a national reference laboratory in a smaller country